Biom-To-Table(biom转table文件)
格式转换工具,将biom格式转换为table格式
输入:
biom格式的OTU Table文本文件
输出:
OTU ID Bio1 Bio2 Bio3 Bio4 Bio5 Bio6 Bio7 Bio8 Bio9 Bio10
OTU1 0 0 0 0 0 6 34 104 367 254
OTU2 52 335 18 49 0 0 0 0 0 0
OTU3 0 0 0 0 5 0 0 0 0 0
biom格式参考:http://biom-format.org/
相关文献如下所示:
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome. Daniel McDonald, Jose C. Clemente, Justin Kuczynski, Jai Ram Rideout, Jesse Stombaugh, Doug Wendel, Andreas Wilke, Susan Huse, John Hufnagle, Folker Meyer, Rob Knight, and J. Gregory Caporaso.GigaScience 2012, 1:7. doi:10.1186/2047-217X-1-7